BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F12LP1|AL428948
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1765 0.0
>3x_Contig1800
Length = 38778
Score = 1765 bits (889), Expect = 0.0
Identities = 901/905 (99%), Gaps = 1/905 (0%)
Strand = Plus / Minus
Query: 1 agagtgttcttggtattcagcccaagtratacccttagtgtccaacaaatcaacgatgtt 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 14023 agagtgttcttggtattcagcccaagagatacccttagtgtccaacaaatcaacgatgtt 13964
Query: 61 agacacattggatggcatagaaataaatctgtcatcatccaaggcgaagtawtcaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 13963 agacacattggatggcatagaaataaatctgtcatcatccaaggcgaagtaatcaccacc 13904
Query: 121 gacagaagccaaatagtttggttctgaaggtgtgagtcaaagcccagtagttggtcaagg 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13903 gacagaagccaaatagtttggttctgaagg-gtgagtcaaagcccagtagttggtcaagg 13845
Query: 181 taataccttgttcagccagccatgaaagggattcatcaccagcagccttgtcgtaatcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13844 taataccttgttcagccagccatgaaagggattcatcaccagcagccttgtcgtaatcgg 13785
Query: 241 tgttttccaagaagataatgaagaatctcttgaaagcggcaccttcgacatctgaaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13784 tgttttccaagaagataatgaagaatctcttgaaagcggcaccttcgacatctgaaacca 13725
Query: 301 cctcagcaacctcagtagcagaagcggcggattcaatttcactcaaacttggagagatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13724 cctcagcaacctcagtagcagaagcggcggattcaatttcactcaaacttggagagatag 13665
Query: 361 tagagtaagttctcaacaaagcggtgtcagcagtgttagcactgacggtaacggcattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13664 tagagtaagttctcaacaaagcggtgtcagcagtgttagcactgacggtaacggcattta 13605
Query: 421 aggcaagagcacctaatccgagaacactaaaatcggagaatttcattttttatgtttaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13604 aggcaagagcacctaatccgagaacactaaaatcggagaatttcattttttatgtttaaa 13545
Query: 481 actggagtgctacctgagcttgcgctgtaattctctgaatccttggctggtttttttgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13544 actggagtgctacctgagcttgcgctgtaattctctgaatccttggctggtttttttgat 13485
Query: 541 caatcccatatagctaacataatacaaaattccaacctgaattgacctttcaaccattcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13484 caatcccatatagctaacataatacaaaattccaacctgaattgacctttcaaccattcg 13425
Query: 601 agagactcaattgacgccagatttatatgtttcacaaaatccgatgagctgaagctgaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13424 agagactcaattgacgccagatttatatgtttcacaaaatccgatgagctgaagctgaag 13365
Query: 661 ctaaaaacaactattagccgatcctaaatgcacacatttaactgccgagggttcacacgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13364 ctaaaaacaactattagccgatcctaaatgcacacatttaactgccgagggttcacacgt 13305
Query: 721 gtggaaatgatgcccacatgcgtgctgggaaaaccgagccaaactgcataccgcaaggcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13304 gtggaaatgatgcccacatgcgtgctgggaaaaccgagccaaactgcataccgcaaggcg 13245
Query: 781 gtatgcaaccggctcaaaggtcaatacttttcccaattcaggcaatttaaacgtacttca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13244 gtatgcaaccggctcaaaggtcaatacttttcccaattcaggcaatttaaacgtacttca 13185
Query: 841 atgacataccggcccatgtgctaacgtctaacagtaactgttagaataatccattaagag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13184 atgacataccggcccatgtgctaacgtctaacagtaactgttagaataatccattaagag 13125
Query: 901 tctaa 905
|||||
Sbjct: 13124 tctaa 13120
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5822
Number of Sequences: 1807
Number of extensions: 5822
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)